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Home医源资料库在线期刊微生物临床杂志2005年第43卷第2期

Duplex PCR To Differentiate between Mycoplasma synoviae and Mycoplasma gallisepticum on the Basis of Conserved Species-Specific Sequences of Their Hemagglutin

来源:微生物临床杂志
摘要:LaboratoiredesMycoplasmes,InstitutPasteurdeTunis,Tunis,TunisiaABSTRACTWedevelopedaduplexPCRassaytargetingthehemagglutininmultigenefamilies,vlhAandpMGA,ofMycoplasmasynoviaeandMycoplasmagallisepticum,respectively。TEXTMycoplasmagallisepticumandM。synoviaearecon......

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    Laboratoire des Mycoplasmes, Institut Pasteur de Tunis, Tunis, Tunisia

    ABSTRACT

    We developed a duplex PCR assay targeting the hemagglutinin multigene families, vlhA and pMGA, of Mycoplasma synoviae and Mycoplasma gallisepticum, respectively. The assay proved to be specific and sensitive enough to justify its use for the simultaneous detection of the two major avian mycoplasma species from field isolates.

    TEXT

    Mycoplasma gallisepticum and M. synoviae are considered important in commercial poultry industries. M. gallisepticum causes chronic respiratory disease in chickens and sinusitis in turkeys (17), and M. synoviae is commonly involved in respiratory tract infection, synovitis in chickens, and poor growth (12). The antigenic relatedness (1, 2, 7, 11) of these organisms make them difficult to identify with conventional serological tests (5, 6). Attempts to differentiate between these two major avian mycoplasmas by using molecular methods, such as PCR tests, were mainly based on the 16S rRNA gene (4, 10, 13). However, it often requires additional steps, such as restriction fragment length analysis (9) or hybridization with species-specific probes (3, 10). In addition, these analyses resulted in concomitant amplification of unrelated bacterial DNA, making this approach useless for the testing of clinical material.

    We show here that PCR amplification targeting species-specific structural genes provides an efficient tool for the simultaneous detection and differentiation of M. gallisepticum and M. synoviae.

    The Mycoplasma species and walled bacteria used in the present study are listed in Table 1. All of the mycoplasma strains were propagated in Frey's medium (8). Unrelated bacterial species were cultured in brain heart infusion broth (Difco Laboratories, Detroit, Mich.). Forty tracheal swabs were immediately processed for culture and used as clinical mycoplasma samples to test the applicability of the duplex PCR assay.

    The template DNA of M. synoviae and M. gallisepticum was prepared from 200 μl of culture, to which an equal volume of nonionic detergent mix solution (0.45% Nonidet P-40, 0.45% Tween 20, and 100 μg of proteinase K/ml) was added. The sample was incubated at 56°C for 1 h, boiled for 10 min, and then centrifuged at 14,000 x g for 5 min. Then, 10 μl of the resulting supernatant was directly used for PCR.

    All of the primers used in the present study are listed in Table 2. They targeted pMGA1.2 gene encoding a hemagglutinin protein (pMGA) from M. gallisepticum (14) and M. synoviae2/12 DNA fragment (accession no. M. synoviaeU66314) (3) of the M. synoviae hemagglutinin vlhA gene (15, 16). To confirm the specificity of the amplification reaction, a nested PCR was performed by using inner primers (Tab.2). Additional avian Mycoplasma spp. and other common bacteria (Table 1) were tested to determine the specificity of the duplex PCR assay.

    The amplification reaction was performed in a total volume of 50 μl containing 5 μl of 10x PCR buffer (Amersham Biosciences), 250 μM concentrations of each deoxynucleoside triphosphate (Pharmacia), 50 pmol of each external or internal primers, 2.25 mM MgCl2, 2 U of Taq DNA polymerase (Amersham Biosciences), and 10 μl of DNA template. The mixture was subjected to 30 cycles of amplification consisting of 94°C for 1 min, 53°C for 2 min, and 72°C for 1 min in a thermal cycler (Perkin-Elmer GeneAmp PCR system 9700). Then, 7 μl of the amplified product was subjected to the second amplification round with the inner primers under the conditions of amplification described above except that the annealing temperature was 60°C.

    As shown in Fig. 1, both outer and internal primers yielded the expected products from all M. gallisepticum and M. synoviae reference strains. No amplicons were observed with DNA from other avian mycoplasma species (Fig. 1a and b, lanes 6 to 10 and lanes 5 to 9, respectively) and unrelated bacteria (data not shown). Inner primers were also used in a nested PCR, and this confirmed the specificity of the amplicons generated by outer primers (data not shown). Optimization experiments showed that, in the duplex PCR, the optimal MgCl2 concentration is 2.25 mM.

    To assess the applicability and the robustness of the assay on clinical samples, 40 tracheal swabs were subjected to culture and duplex PCR. Of the 40 cultures, 32 were positive. The duplex PCR showed amplification only when the DNA was processed from a 24-h culture (enrichment step). A total of 26 samples turned out to be PCR positive; among these, 7 could be assigned to M. gallisepticum (Fig. 2, lanes 2, 5, 9, 13, 14, 21, and 25), whereas the other 19 corresponded to M. synoviae (Fig. 2, lanes 3, 4, 6, 10 to 12, 15 to 20, 22 to 24, and 26 to 29). The remaining six samples that were culture positive but PCR negative were identified as M. meleagridis by slot blot assay with a digoxigenin-labeled M. meleagridis DNA probe (data not shown). All PCR-positive clinical samples were confirmed by the nested PCR and a capture enzyme-linked immunosorbent assay ELISA (2). With regard to sensitivity, the duplex PCR allowed detection of 90 and 250 CFU of M. synoviae and M. gallisepticum, respectively (data not shown).

    The primary objective of the present study was to develop a robust PCR for the simultaneous detection and differentiation of M. synoviae and M. gallisepticum. This aim was made possible by targeting conserved species-specific sequences that belong to multigene families (3, 14). With this duplex PCR, detection and differentiation of both mycoplasmas could be achieved in a single reaction, which greatly improves the rapid detection of these pathogens. The robustness of the test is further demonstrated by the fact that no amplification occurred with other mollicutes and unrelated bacteria commonly found in clinical samples.

    The enrichment step, which consists of the incubation of specimens for 24 h prior to detergent treatment, is crucial. Indeed, the sensitivity of the duplex PCR was raised to 100% compared to culture. This is certainly due to an increase of the DNA starting material and the reduction of PCR inhibitors present in the original sample. It is also tempting to speculate that increased sensitivity of the test would have benefited from the multicopy nature of the targeted genes, thereby enhancing the intrinsic sensitivity of the test. In this respect, primers that result in small amplicons would also increase the sensitivity. This has been recently confirmed in our laboratory as enhanced sensitivity was achieved when the primer pairs pMGAF1i-pMGAR1i and MS1.2F1i-MS1.2R2i (500- and 450-bp products, respectively) were used directly with mycoplasma DNA in a single duplex PCR (data not shown).

    Overall, these results strongly support the use of this duplex PCR assay as an efficient alternative to culture and serological identification, which are labor-intensive, extremely time-consuming, and often provide confusing results.

    ACKNOWLEDGMENTS

    This study was supported by a grant for Developmental Scientific Research from Institut Pasteur de Tunis and the SERST (Secretariat d'Etat a la Recherche Scientifique et a la Technologie), which is an organization of the Government of Tunisia.

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作者: B. Ben Abdelmoumen Mardassi, R. Ben Mohamed, I. Gu 2007-5-10
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