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引物特异性HCV基因分型检测方法的建立及应用

来源:中国医学检验杂志
摘要:摘要:[目的]建立引物特异性HCVRNA基因分型的方法,并应用于临床诊断。[方法]采用型特异性引物建立单管逆转录聚合酶链反应(RT-PCR)和双管引物特异性套式聚合酶链反应(NEST-PCR)检测技术,1b和3a一管内扩增,1a、2a和2b一管内扩增,分别对147例HCV抗体阳性的标本,设计HCV的C区特异性引物,采用Trizol浓缩RNA进行双管巢......

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摘 要:

[目的]建立引物特异性HCVRNA基因分型的方法,并应用于临床诊断。[方法]采用型特异性引物建立单管逆转录聚合酶链反应(RT-PCR)和双管引物特异性套式聚合酶链反应(NEST-PCR)检测技术,1b和3a一管内扩增,1a、2a和2b一管内扩增,分别对147例HCV抗体阳性的标本,设计HCV的C区特异性引物,采用Trizol浓缩RNA进行双管巢式PCR分型。[结果]统计结果表明我国丙型肝炎流行主要以1b(Ⅱ)和2a(Ⅲ)2种基因型为主,但有部分1a、2b、3a的HCV感染者检出,其中1a为1.36%(2/147),1b为65.99%(97/147),2a为6.12%(9/147),3a为1.36%(2/147),1b/2a型混合占22.45%(33/147),1a/2b混合型为0.68%(1/147),未分出型或其它型者分别为2.04%(3/147)。[结论]本文建立的方法具有良好的特异性和敏感性,可同时区分5种HCV基因型,我国北方地区发现有1a和3a基因型感染病例。

Establishment and application of genotype assay of HCV by dNest - PCR based on type - specific primers

Abstract:

[ Objective] To establish a method to type HCV by dNest - PCR based on type - specific primers. [ Methods] One tube RT -PCR and two tubes of Nest -PCR by specific -primer base on HCV C area (1b and 3a in 1 tube, 1a, 2a and 2b in another) were used to detect in samples from 147 HCV antibody -positive cases. [ Results] The 1b and 2a were the main genotypes of HCV in China. There were only 2 patients with 1a and 2 with 3a. For the 147 patients, the detecting rate of 1a, 1b, 2a, 3a, 1b mixed with 2a, 1a mixed with 2b and other genotypes was 1.36%, 65.99%, 6.12%, 1.36%, 22.45%, 0.68% and 2.04%, respectively. [ Conclusion] dNest- PCR based on genotype specific primers has high sensitivity and specificity. The genotypes of 1a and 3a are found in patients with HCV infection in North China.

Key words:

HCV; HCV typing by PCR with type -specific primers; RT- PCR; Nest -PCR


作者: 刘立明王… 2009-2-21
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